Python script for setting up an ADCP processing directory

   USAGE:
      python adcptree.py  processing_directory [uh_progs_root]  [options]
                                   (1)              (2)              (3)


       (1) required

           processing directory is the name of the processing directory.
           It can be a full path or a relative path.  Good choices are the
           cruise name (for averaged data) or the instrument name (for raw
           data)

       (2) deduced from path to adcptree.py:
           (should not be necessary to override)

       (3) options are:

          -d, --datatype      : choose what kind of data logging (and
                              : hence which kind of data files are being
                              : processed)
                              :
                              : name          what
                              : ----          ----
                              : "uhdas"        implies known directory
                              :                    structure for access
                              :                    to raw data
                              : "lta", "sta"   VmDAS averages
                              : "enx"          implies VmDAS single-ping
                              :                    data,time-corrected,
                              :                    navigated with attitude
                              :
                              : "hdss"         Hdss sonars (on the Revelle)
                              :
                              : "pingdata"     implies DAS2.48 (or 2.49) NB
                              :                    data, already averaged
                              : "ping"         (same)

                         ---------------------------------------------

             --configbase     :   uhdas only (use --verbose for more info)
                              :         default =  "cruise"
             --configpath     :   uhdas only  (use --verbose for more info)
                              :         default = "../raw/config"
          -h, --help          : print this help
          -v, --verbose       : print notes about uhdas logging
                              :            (see previous options)
          -V, --varvals       : print list of options and their values

USAGE:

UNIX:
 example: (for pingdata:)
    adcptree.py vg0304

 example (for LTA data:)
    adcptree.py vg0404   --datatype lta
    adcptree.py vg0404  -d lta

 example (for uhdas OS data:) NOTE: find the configuration files from your cruise!
         Creating these from the templates is really strating from scratch

    adcptree.py kok0517  -d uhdas --configbase kok0517 --configpath /home/data/kok0517/raw/config

 example (for hdss data:) ==>NOTE: critical instructions follow
                             the creation of the processing directory
                             structure.  Be sure to follow both steps.
    adcptree.py vg0501  --datatype hdss

DOS: (adcptree_py.bat is a shell to pass the options to adcptree.py)

 example: (for pingdata:)
    adcptree_py vg0304

 example (for LTA data:)
    adcptree_py vg0404    --datatype lta
    adcptree_py vg0404  -d lta