LAST CHANGED : 2021/07/08 18:14:33 CRUISE NAME(S) : FK210605 CRUISE DATES : 2021/06/06 07:10:16 to 2021/07/08 18:14:18 SHIP NAME : Falkor PORTS : Honolulu, USA to Honolulu, USA CHIEF SCIENTIST : Randi Rotjan DATABASE NAME : a_fk DATA FILES : fk2021_156_25696.raw to fk2021_188_64800.raw STATUS : to do done ------ ----------- averaged [ X ] loaded [ X ] # done at sea NOTE: heading correction instrument exists NOTE: time-dependent heading corrections applied IN the ensembles (see cal/rotate/ens_hcorr.ang) check heading correction [ X ] calibration [ X ] edited [ X ] re-check heading correction [ X ] check editing [ X ] figures [ X ] INSTRUMENT : wh300 ACQUISITION : PROGRAM : uhdas PROCESSING: : python LOGGING : PARAMETERS : BT : bottom track mode (on or off) SI : sampling interval or averaging period for ensemble (sec) NB : number of bins BL : bin length (m) TD : transducer depth (m) BK : blanking length (m) HO : heading offset applied by DAS (deg) HB : heading bias (deg) CRPH : compensation for roll-pitch-heading, 1:on, 0:off) yy/mm/dd hh:mm:ss BT SI NB BL TD BK HO HB CRPH 2021/06/06 07:10:16 off 120 70 2 7 2 44.63 0.00 0001 2021/06/12 00:12:00 off 120 70 2 7 2 44.63 0.00 0001 2021/07/03 08:01:50 off 120 70 2 7 2 44.63 0.00 0001 2021/07/08 07:38:17 on 120 70 2 7 2 44.63 0.00 0001 HEADING : PRIMARY : heading from gyro CORRECTION : heading correction from seapath NOTE: time-dependent heading corrections applied IN the ensembles (see cal/rotate/ens_hcorr.ang) POSITIONS : gps positions from cnav CALIBRATION : os75nb original alignment: 44.63 additional rotation: 0 final transducer angle is: 44.63 (44.63) - (0) original scalefactor: 1.0 additional scale factor (none) final scale factor: 1.0 COMMENTS : Falkor ROV cruise out of Hawaii. We use the bottomtrack points from this cruise for flanking calibrations on cruises FK210409 and FK210501. PROCESSOR : Joseph Gum --- processing parameters ---------- ## (determined from "sonar"): model = wh ## (determined from "sonar"): frequency = 300 ## (determined from "sonar"): instname = wh300 ## (determined from "sonar"): pingtype = bb beamangle 20 cruisename FK210605 datatype uhdas ens_len 120 fixfile a_fk.gps frequency 300 hcorr_inst seapath instname wh300 model wh pingtype bb proc_engine python ref_method refsm refuv_smoothwin 3 refuv_source nav sonar wh300 txy_file a_fk.agt xducer_dx 2 xducer_dy 18 yearbase 2021 ================================================== PROCESSING STEPS: ================================================== # Processing commands start in the wh300 directory. ----------------------------- # 1. Check heading correction ----------------------------- Check that we have a good heading correction for all of the ADCP data. There should be no holes in the heading correction graphs, where good fixes are green circles and no fixes are red crosses. Gaps in the plots where there are no symbols are okay, no data was collected there. If there are red crosses on the heading correction graphs (cal/rotate/ens_hcorr_*.png) then they need to be patched in the cal/rotate dir using patch_hcorr.py. $ plot_nav.py nav/a_fk.gps $ figview.py --------------------- # 2. ADCP calibration --------------------- Calibrate the dataset in sum by checking the calibration values and applying a fix to the necessary categories if necessary. When looking at a water track or bottom track calibration, we want to see statistics inside the following values: median_tolerance amplitude 1.003 # 0.3% phase/angle 0.05 When looking at an xy calibration to adjust the relative location of the sonar to the currently known location we hope that the dx and dy values are as close to 0 as possible, and the signal is between 1000 and 5000. Less than 1000 means very little data, more than 5000 means too much change. If values are out of range we make a bulk correction to the entire dataset which should reduce the number of outliers to be edited out. If we make any changes to x or y they should be integers. $ catwt **watertrack** ------------ Number of edited points: 20 out of 32 amp = 0.9992 + 0.0000 (t - 171.0) phase = -0.14 + -0.0044 (t - 171.0) median mean std amplitude 0.9990 0.9992 0.0063 phase -0.1775 -0.1370 0.4464 ------------ $ catbt **bottomtrack** ------------ unedited: 5 points edited: 5 points, 2.0 min speed, 2.5 max dev median mean std amplitude 0.9970 0.9969 0.0018 phase -0.0308 0.0070 0.1090 ------------ $ catxy **transducer-gps offset** ------------ guessing ADCP (dx=starboard, dy=fwd) meters from GPS positions from a_fk.agt calculation done at 2021/07/18 21:41:39 xducer_dx = 0.174500 xducer_dy = 5.423255 signal = 609.263836 ------------ There isn't much of a bottomtrack calibration or xy needed, so we'll move on. ------------------- # 3. Editing points ------------------- Edit out biased data or artifacts deeper than the range of the sonar in the dataset, or other problems. Use `dataviewer.py -e` to look for problems with the data and flag the bad data as bad. After editing out data we rerun the calibration to see if the changed dataset statistics have changed enough that a new calibration is needed. $ dataviewer.py -e Removed a possible ROV shadow at 164.23. Removed trouble spots, deep water shadows. $ quick_adcp.py --steps2rerun navsteps:calib --auto $ catwt **watertrack** ------------ Number of edited points: 18 out of 25 amp = 0.9994 + 0.0001 (t - 170.8) phase = -0.15 + -0.0116 (t - 170.8) median mean std amplitude 0.9990 0.9994 0.0066 phase -0.1775 -0.1541 0.4555 ------------ $ catbt **bottomtrack** ------------ unedited: 5 points edited: 5 points, 2.0 min speed, 2.5 max dev median mean std amplitude 0.9970 0.9969 0.0018 phase -0.0308 0.0070 0.1090 ------------ $ catxy **transducer-gps offset** ------------ guessing ADCP (dx=starboard, dy=fwd) meters from GPS positions from a_fk.agt calculation done at 2021/07/28 01:51:25 xducer_dx = -0.800536 xducer_dy = 0.433436 signal = 609.263836 ------------ Bottom track still looks good, xy has cleaned up. -------------------------------------------------- # 4. Re-check heading correction and other figures -------------------------------------------------- Check all figures again to make sure that any problems were addressed and no new problems have appeared after making changes to the dataset. $ figview.py The figures look fine. -------------------------------------------------------------- # 5. Check edited, calibrated dataset against original dataset -------------------------------------------------------------- Compare the edited, calibrated (or lack thereof) dataset against the original dataset to make sure all problems have been dealt with and no new problems have appeared. $ dataviewer.py -c . ../wh300.orig More editing was done at this stage. Not much else has changed. $ quick_adcp.py --steps2rerun navsteps:calib --auto $ catwt **watertrack** ------------ Number of edited points: 18 out of 25 amp = 0.9994 + 0.0001 (t - 170.8) phase = -0.15 + -0.0116 (t - 170.8) median mean std amplitude 0.9990 0.9994 0.0066 phase -0.1775 -0.1541 0.4555 ------------ $ catbt **bottomtrack** ------------ unedited: 5 points edited: 5 points, 2.0 min speed, 2.5 max dev median mean std amplitude 0.9970 0.9969 0.0018 phase -0.0308 0.0070 0.1090 ------------ $ catxy **transducer-gps offset** ------------ guessing ADCP (dx=starboard, dy=fwd) meters from GPS positions from a_fk.agt calculation done at 2021/07/28 01:57:21 xducer_dx = -0.800824 xducer_dy = 0.432973 signal = 609.263836 ------------ ------------------------- # 6. Make plots and files ------------------------- Create the figures and data files needed to finish processing and make public/submit to a repository (JASADCP, if nowhere else). Make the plots needed for web viewing, matlab files (legacy), and netCDF files, then check that the netCDF files are readable. Plots should be in 3 to 5 day chunks for a cruise longer than one week, or divided by geographic features where it makes sense. $ quick_web.py --interactive $ quick_adcp.py --steps2rerun matfiles --auto $ adcp_nc.py adcpdb contour/wh300 FK210605 wh300 --ship_name Falkor $ ncdump contour/wh300.nc -h We need to check permissions on processed cruises for review and publishing. $ chown -R jgum:efiring wh300 $ chmod -R ug+rwX wh300 ~